Nextflow workflow report

[jolly_edison]

Run times

15-Sep-2025 21:35:50 - 16-Sep-2025 21:58:12 (duration: 1d 22m 22s)

  19499 succeeded  

  0 cached  

  0 ignored  

  38 failed  

Nextflow command

nextflow run /app/pipelines/gnps_ml_processing_workflow/GNPS_ML_Processing/nf_workflow.nf --GNPS_json_path /output/ALL_GNPS_NO_PROPOGATED.json --output_dir /output/cleaned_data/ --conda_path /app/pipelines/conda_envs/gnps2_ml_processing_env --matchms_conda_path /app/pipelines/conda_envs/matchms_env --api_cache /output/structure_classification/ -with-report /output/cleaned_data/ml_pipeline_report.html -with-timeline /output/cleaned_data/ml_pipeline_timeline.html -w /data/gscratch/web-services/Cleaning_Pipelines/work

CPU-Hours

25.3 (0.2% failed)

Launch directory

/app

Work directory

/data/gscratch/web-services/Cleaning_Pipelines/work

Project directory

/app/pipelines/gnps_ml_processing_workflow/GNPS_ML_Processing

Script name

nf_workflow.nf

Script ID

afcc81be764f89a8ca3d0acafc573b2c

Workflow session

616fc528-9a9f-44b4-bcb1-9068cd8f8666

Workflow profile

standard

Nextflow version

version 24.04.4, build 5917 (01-08-2024 07:05 UTC)