Nextflow workflow report

[soggy_hypatia]

Run times

27-Nov-2025 23:46:06 - 28-Nov-2025 22:51:20 (duration: 23h 5m 14s)

  19501 succeeded  

  0 cached  

  0 ignored  

  1 failed  

Nextflow command

nextflow run /app/pipelines/gnps_ml_processing_workflow/GNPS_ML_Processing/nf_workflow.nf --GNPS_json_path /output/ALL_GNPS_NO_PROPOGATED.json --output_dir /output/cleaned_data/ --conda_path /app/pipelines/conda_envs/gnps2_ml_processing_env --matchms_conda_path /app/pipelines/conda_envs/matchms_env --api_cache /output/structure_classification/ -with-report /output/cleaned_data/ml_pipeline_report.html -with-timeline /output/cleaned_data/ml_pipeline_timeline.html -w /data/gscratch/web-services/Cleaning_Pipelines/work

CPU-Hours

24.2 (0% failed)

Launch directory

/app

Work directory

/data/gscratch/web-services/Cleaning_Pipelines/work

Project directory

/app/pipelines/gnps_ml_processing_workflow/GNPS_ML_Processing

Script name

nf_workflow.nf

Script ID

d07e4bbd5164ef48fc8bd5c492e8eef2

Workflow session

26d6daf4-6585-46fe-9d76-93a623796ee0

Workflow profile

standard

Nextflow version

version 24.04.4, build 5917 (01-08-2024 07:05 UTC)