Nextflow workflow report

[astonishing_keller]

Workflow execution completed successfully!
Run times
06-Jul-2025 04:10:40 - 06-Jul-2025 15:21:21 (duration: 11h 10m 41s)
  20011 succeeded  
  0 cached  
  0 ignored  
  0 failed (0 retries)  
Nextflow command
nextflow run /app/pipelines//gnps_ml_processing_workflow/GNPS_ML_Processing/nf_workflow.nf --GNPS_json_path /output/ALL_GNPS_NO_PROPOGATED.json --output_dir /output/cleaned_data/ --conda_path /output/cleaned_data/gnps2_ml_processing_env --matchms_conda_path /output/cleaned_data/matchms_env --api_cache /output/structure_classification/ -with-report /output/cleaned_data/ml_pipeline_report.html
CPU-Hours
22.4
Launch directory
/app
Work directory
/app/work
Project directory
/app/pipelines/gnps_ml_processing_workflow/GNPS_ML_Processing
Script name
nf_workflow.nf
Script ID
01ca902e101cebcb8026d4864a569795
Workflow session
8c20b456-a477-40f6-8946-6c47292fc5b4
Workflow profile
standard
Nextflow version
version 25.04.3, build 5949 (02-06-2025 20:56 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)